fluoanalysis matlab toolbox Search Results


fluoanalysis matlab toolbox  (MathWorks Inc)
96
MathWorks Inc fluoanalysis matlab toolbox
Main GUI of the <t>FluoAnalysis</t> toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.
Fluoanalysis Matlab Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/fluoanalysis matlab toolbox/product/MathWorks Inc
Average 96 stars, based on 1 article reviews
fluoanalysis matlab toolbox - by Bioz Stars, 2026-03
96/100 stars
  Buy from Supplier
fluoanalysis toolbox  (MathWorks Inc)
90
MathWorks Inc fluoanalysis toolbox
Main GUI of the <t>FluoAnalysis</t> toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.
Fluoanalysis Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/fluoanalysis toolbox/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
fluoanalysis toolbox - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
statistics and machine learning  (MathWorks Inc)
90
MathWorks Inc statistics and machine learning
Main GUI of the <t>FluoAnalysis</t> toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.
Statistics And Machine Learning, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/statistics and machine learning/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
statistics and machine learning - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
virus strains aav2 1  (Addgene inc)
97
Addgene inc virus strains aav2 1
Main GUI of the <t>FluoAnalysis</t> toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.
Virus Strains Aav2 1, supplied by Addgene inc, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/virus strains aav2 1/product/Addgene inc
Average 97 stars, based on 1 article reviews
virus strains aav2 1 - by Bioz Stars, 2026-03
97/100 stars
  Buy from Supplier

Image Search Results


Main GUI of the FluoAnalysis toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.

Journal: Brain Sciences

Article Title: FluoAnalysis: An Open-Source MATLAB Toolbox for Analysis of Calcium Imaging Measurements of Oscillatory Astrocytic and Neuronal Networks

doi: 10.3390/brainsci14080830

Figure Lengend Snippet: Main GUI of the FluoAnalysis toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.

Article Snippet: In conclusion, the FluoAnalysis MATLAB toolbox provides a powerful and versatile platform for the comprehensive analysis of calcium imaging and electrophysiological data, supporting a wide range of research applications in neuroscience.

Techniques: Control, Slice Preparation, Expressing

A GUI for classification and spectral analysis of Ca 2+ imaging data of individual cells. High Ca 2+ imaging sampling rate (68 Hz) together with the unique spectral analysis capabilities of the FluoAnalysis toolbox enables the identification of a high-frequency imaging signal that corresponds to the firing rate of a cortical pyramidal cell as measured by patch clamp electrophysiology. All imaged cells (listed on the right) can be individually investigated. Automatic classification of the cells as neurons or astrocytes, based on the ratio of green and red channel intensities in the ROIs, can be manually overridden. Wavelet analysis can be easily applied at different frequency bands.

Journal: Brain Sciences

Article Title: FluoAnalysis: An Open-Source MATLAB Toolbox for Analysis of Calcium Imaging Measurements of Oscillatory Astrocytic and Neuronal Networks

doi: 10.3390/brainsci14080830

Figure Lengend Snippet: A GUI for classification and spectral analysis of Ca 2+ imaging data of individual cells. High Ca 2+ imaging sampling rate (68 Hz) together with the unique spectral analysis capabilities of the FluoAnalysis toolbox enables the identification of a high-frequency imaging signal that corresponds to the firing rate of a cortical pyramidal cell as measured by patch clamp electrophysiology. All imaged cells (listed on the right) can be individually investigated. Automatic classification of the cells as neurons or astrocytes, based on the ratio of green and red channel intensities in the ROIs, can be manually overridden. Wavelet analysis can be easily applied at different frequency bands.

Article Snippet: In conclusion, the FluoAnalysis MATLAB toolbox provides a powerful and versatile platform for the comprehensive analysis of calcium imaging and electrophysiological data, supporting a wide range of research applications in neuroscience.

Techniques: Imaging, Sampling, Patch Clamp

Comparison of features of the FluoAnalysis toolbox with other calcium imaging analysis tools.

Journal: Brain Sciences

Article Title: FluoAnalysis: An Open-Source MATLAB Toolbox for Analysis of Calcium Imaging Measurements of Oscillatory Astrocytic and Neuronal Networks

doi: 10.3390/brainsci14080830

Figure Lengend Snippet: Comparison of features of the FluoAnalysis toolbox with other calcium imaging analysis tools.

Article Snippet: In conclusion, the FluoAnalysis MATLAB toolbox provides a powerful and versatile platform for the comprehensive analysis of calcium imaging and electrophysiological data, supporting a wide range of research applications in neuroscience.

Techniques: Comparison, Imaging

Main GUI of the FluoAnalysis toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.

Journal: Brain Sciences

Article Title: FluoAnalysis: An Open-Source MATLAB Toolbox for Analysis of Calcium Imaging Measurements of Oscillatory Astrocytic and Neuronal Networks

doi: 10.3390/brainsci14080830

Figure Lengend Snippet: Main GUI of the FluoAnalysis toolbox. A multi-tiff file, imported into the GUI with the identified ROIs marked by yellow contours ( top left ). Average projection of the 546 imported frame is visible at the ( top right ), followed by a thresholded binary image and the ROIs in pseudo colors below. ROI detection and ΔF/F 0 calculation parameters are located in the middle column. The calculated ΔF/F 0 traces for all identified ROIs during a control period and application of 1 mM ATP to a hippocampal brain slice expressing GCaMP2 calcium-sensitive fluorescent protein in neurons and astrocytes are visible in the bottom left.

Article Snippet: The FluoAnalysis toolbox is freely available to download from GitHub ( https://github.com/hejalaszlo/FluoAnalysis , accessed at 16 August 2024) and the Matlab File Exchange website ( https://www.mathworks.com/matlabcentral/fileexchange/169801-fluoanalysis , accessed at 16 August 2024) along with sample data that demonstrate the capability of the software.

Techniques: Control, Slice Preparation, Expressing

A GUI for classification and spectral analysis of Ca 2+ imaging data of individual cells. High Ca 2+ imaging sampling rate (68 Hz) together with the unique spectral analysis capabilities of the FluoAnalysis toolbox enables the identification of a high-frequency imaging signal that corresponds to the firing rate of a cortical pyramidal cell as measured by patch clamp electrophysiology. All imaged cells (listed on the right) can be individually investigated. Automatic classification of the cells as neurons or astrocytes, based on the ratio of green and red channel intensities in the ROIs, can be manually overridden. Wavelet analysis can be easily applied at different frequency bands.

Journal: Brain Sciences

Article Title: FluoAnalysis: An Open-Source MATLAB Toolbox for Analysis of Calcium Imaging Measurements of Oscillatory Astrocytic and Neuronal Networks

doi: 10.3390/brainsci14080830

Figure Lengend Snippet: A GUI for classification and spectral analysis of Ca 2+ imaging data of individual cells. High Ca 2+ imaging sampling rate (68 Hz) together with the unique spectral analysis capabilities of the FluoAnalysis toolbox enables the identification of a high-frequency imaging signal that corresponds to the firing rate of a cortical pyramidal cell as measured by patch clamp electrophysiology. All imaged cells (listed on the right) can be individually investigated. Automatic classification of the cells as neurons or astrocytes, based on the ratio of green and red channel intensities in the ROIs, can be manually overridden. Wavelet analysis can be easily applied at different frequency bands.

Article Snippet: The FluoAnalysis toolbox is freely available to download from GitHub ( https://github.com/hejalaszlo/FluoAnalysis , accessed at 16 August 2024) and the Matlab File Exchange website ( https://www.mathworks.com/matlabcentral/fileexchange/169801-fluoanalysis , accessed at 16 August 2024) along with sample data that demonstrate the capability of the software.

Techniques: Imaging, Sampling, Patch Clamp

Comparison of features of the FluoAnalysis toolbox with other calcium imaging analysis tools.

Journal: Brain Sciences

Article Title: FluoAnalysis: An Open-Source MATLAB Toolbox for Analysis of Calcium Imaging Measurements of Oscillatory Astrocytic and Neuronal Networks

doi: 10.3390/brainsci14080830

Figure Lengend Snippet: Comparison of features of the FluoAnalysis toolbox with other calcium imaging analysis tools.

Article Snippet: The FluoAnalysis toolbox is freely available to download from GitHub ( https://github.com/hejalaszlo/FluoAnalysis , accessed at 16 August 2024) and the Matlab File Exchange website ( https://www.mathworks.com/matlabcentral/fileexchange/169801-fluoanalysis , accessed at 16 August 2024) along with sample data that demonstrate the capability of the software.

Techniques: Comparison, Imaging